Molecular Dynamics Simulations - Movie A

FIGURE 7


100 frame mpeg movie of a 300 picosecond molecular dynamics simulation of the Glucocorticoid Receptor (GR) DNA binding domain (DBD) in complex with a 29 base pair Glucocorticoid response element (GRE) DNA sequence computed in a 10 angstrom water layer (see figure 3b). H-bonds are represented as white dashed lines. Only those water molecules that mediate DNA/protein interactions at some point during the simulation are shown (1,264,584 bytes). Click on the image to download the movie.